Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015912539.1_cds_XP_016462625.1_55834
CDS Infomation

[gene=LOC107785766] [db_xref=GeneID:107785766] [protein=subtilisin-like protease SBT5.6] [protein_id=XP_016462625.1] [location=join(60163..60237,60334..60526,60744..60923,61462..61573,63705..64266,64409..64506,64614..64971,65066..65279,65477..66012)] [gbkey=CDS]
Sequence

ATGAAGATTTTTTCCATATTCTCTTTGCTTCTTCTCCTTCTCCTTCCCATCTTGGCTTCA
TGTCATGAAAAACAGGTTTATATAGTGTATTTTGGAGGACATAAAGGGGAGAAAGCATTG
CATGAGATTGAAGAAAACCATCACTCATATCTCATGTCAGTGAAGGAAAGTGAAGAAGAA
GCCAGATATTCTCTTATTTACAGTTACAAACATAGCATCAATGGCTTTGCTGCACTTCTC
ACCCCACATGAAGCCTCCAAGTTATCTGAATTGGAAGAAGTGGTATCGGTGTATAAAAGT
GAGCCAAGGAAATACAGATTGCAAACAACAAGGTCATGGGAATTTTCTGGAGTGGAAGAG
TCAGTGCAACCAAATTCCTTGAACAAGGATAACTTGCTACTGAAAGCCAGATATGGCAAA
GATGTCATTATTGGCGTTCTTGACAGCGGGCTATGGCCAGAATCTAAGAGCTTTAGTGAT
GAAGGGTTGGGACCGATTCCAAAGTCATGGAAAGGAATCTGCCAATCTGGAGATGCTTTC
AACTCTTCAAACTGTAATAAGAAAATAATTGGAGCTAGGTACTACATCAAAGGTTACGAG
CAATATTATGGCCCTCTAAACCGAACTCTAGATTATCTATCTCCACGAGACAAGGATGGA
CATGGAACTCATACATCATCAACAGCAGGAGGCAGAAAGGTTCCAAATGTCTCTGCCATT
GGTGGCTTTGCATCTGGCACCGCCTCGGGTGGCGCGCCACTCGCACGGCTAGCAATGTAC
AAAGTCTGCTGGGCTATTCCGAAGGAGGGCAAAGAAGATGGAAACACTTGCTTTGACGAA
GATATGTTAGCAGCAATGGATGATGCTATTGCAGATGGTGTTGATGTTATTAGCATTTCT
ATTGGAACAAAAGAACCTCAGCCTTTTGATCAAGATAGCATTGCTATTGGAGCACTTTAT
GCTGTGAAGAAAAACATTGTTGTGTCTTGTAGTGCAGGGAATTCAGGACCTGCACCTTCT
ACATTGTCTAACACAGCTCCCTGGATTATCACTGTTGGTGCTAGCAGTGTTGACAGAGCA
TTCTTGTCACCTGTTATCCTAGGAAATGGCAAGAAATTTACGGGACAAACAGTTACACCT
TACAAGCTCGAGAAGGAGATGTACCCTCTAGTTTATGCAGGACAAGTAATCAACTCTAAC
GTAACCAAAGATGTAGCAGGGCAATGTTTACCAGGTTCCCTTTCGCCGAAAAAGGCCAAG
GGGAAGATAGTAATATGCTTGAGAGGGAACGGGACAAGAGTAGGAAAAGGTGGAGAGGTG
AAAAGGGCAGGAGGAATTGGTTACATACTAGGAAATAATAAAGCAAATGGAGCTGAATTA
GTAGCTGATCCTCACTTTCTTCCAGCCACTGCAGTGGACTATAAAAGTGCAATGCAGATT
CTCAACTACATCAATTCTACAAAGTCCCCAGTGGCATATATTGTCCCAGCTAAAACAGTT
TTGCATTCTAAACCAGCACCTTACATGGCTTCCTTCACTAGTAGAGGTCCAAGTGCAGTT
GCACCTGATATCCTCAAGCCTGATATCACCGCACCAGGGCTGAATATATTGGCAGCATGG
AGTGGCGGATCTTCCCCAACGAAACTAGATATCGATGATCGTGTGGTTGAGTATAACATA
ATCTCAGGTACTTCCATGTCTTGCCCACATGTCGGTGGCGCCGCTGCACTTTTGAAGGCT
ATACATCCCACTTGGAGCAGTGCTGCAATAAGATCTGCTCTTATAACCTCAGCTGGATTA
CGAAATAATGTTGGTGAGCAAATAACGGATGCATCAGGGAAGCCAGCAGATCCATTCCAA
TTCGGAGGAGGGCATTTCAGGCCATCAAAGGCAGCAGATCCTGGACTTGTCTACGATGCT
TCCTACCAAGACTATCTTCTCTTCCTTTGCGCTTCTGGTATTAAGGATCTTGACAAATCC
TTCAAGTGTCCCAAGAAATCACATTTACCTAACAACCTAAATTATCCATCTCTGGCTATT
CCCAATCTCAATGGTACTGTTACTGTTAGCAGAAGGTTGACAAATGTTGGTGCACCAAAG
AGTGTTTACTTTGCCAGTGCTAAACCTCCATTGGGATTCTCTGTTGAGATTTCTCCTCCC
GTCTTGTCTTTTAAGCACGTTGGTTCGAAGAGGACGTTCACTATTACAGTGAAAGTTCGA
AGTGATATGATTGACAGTATTCCGAAAGATCAGTATGTGTTTGGATGGTATTCCTGGAAT
GATGGAATCCATAATGTTAGGAGTCCAATTGCAGTCAAATTGGCATAA

Peptide Sequence

PEP ID

XP_016462625.1
PEP Infomation

PREDICTED: subtilisin-like protease SBT5.6 [Nicotiana tabacum]
Sequence

MKIFSIFSLLLLLLLPILASCHEKQVYIVYFGGHKGEKALHEIEENHHSYLMSVKESEEE
ARYSLIYSYKHSINGFAALLTPHEASKLSELEEVVSVYKSEPRKYRLQTTRSWEFSGVEE
SVQPNSLNKDNLLLKARYGKDVIIGVLDSGLWPESKSFSDEGLGPIPKSWKGICQSGDAF
NSSNCNKKIIGARYYIKGYEQYYGPLNRTLDYLSPRDKDGHGTHTSSTAGGRKVPNVSAI
GGFASGTASGGAPLARLAMYKVCWAIPKEGKEDGNTCFDEDMLAAMDDAIADGVDVISIS
IGTKEPQPFDQDSIAIGALYAVKKNIVVSCSAGNSGPAPSTLSNTAPWIITVGASSVDRA
FLSPVILGNGKKFTGQTVTPYKLEKEMYPLVYAGQVINSNVTKDVAGQCLPGSLSPKKAK
GKIVICLRGNGTRVGKGGEVKRAGGIGYILGNNKANGAELVADPHFLPATAVDYKSAMQI
LNYINSTKSPVAYIVPAKTVLHSKPAPYMASFTSRGPSAVAPDILKPDITAPGLNILAAW
SGGSSPTKLDIDDRVVEYNIISGTSMSCPHVGGAAALLKAIHPTWSSAAIRSALITSAGL
RNNVGEQITDASGKPADPFQFGGGHFRPSKAADPGLVYDASYQDYLLFLCASGIKDLDKS
FKCPKKSHLPNNLNYPSLAIPNLNGTVTVSRRLTNVGAPKSVYFASAKPPLGFSVEISPP
VLSFKHVGSKRTFTITVKVRSDMIDSIPKDQYVFGWYSWNDGIHNVRSPIAVKLA

Transcript Sequence

Gene sequence data has not been registered.